The Blessed Eucharist: Our Greatest Treasure (1868)
Prayer: the Key to Salvation (1874)
Familiar Explanation of Christian Doctrine (1875) (This book emphasized the doctrine of EENS which caused some liberal priests to write against him, and Fr. Muller wrote a whole book responding to objections: The Catholic Dogma: Extra Ecclesiam Nullus Omnino Salvatur
Triumph of the Blessed Sacrament: Or History of Nicola Aubry (1877)
The Prodigal Son, or, The Sinner's Return to God.
Public School Education
God the Teacher of Mankind (1877) in nine volumes:
Volume I. The Church and Her Enemies.
II. The Apostles Creed.
III. The First and Greatest Commandment.
IV. Explanation of the Commandments continued.
V. Dignity, Authority and Duties of Parents, Ecclesiastical and Civil Powers. Their Enemy.
VI. Grace and the Sacraments.
VII. The Holy Sacrifice of the Mass.
VIII. Holy Eucharist and Penance.
